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Ex . situ conservation of gene pool of woody plants. CGIAR's new Centre for International Forestry Research (CIFOR) became operational in 1992/93. In addition to the approach of in situ conservation of woody plants/forest trees in forests, by finding more rational location of in situ reserves, CIFOR will also make efforts for long-term ex situ conservation of the gene pool of woody plants. Ex situ conservation will also be facilitated by growing trees in locations, where they do not naturally grow.
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This objective is also being achieved through agroforestry, where farmers grow trees with their crops on agricultural fields. The International Centre for Research on Agroforestry (ICRAF) is doing research in this area, particularly helping African farmers to use agroforestry as a means of their livelihood.
Conservation of germplasm of woody species having recalcitrant seeds (they germinate soon after they fall) has been found to be difficult. These seeds are difficult to dry and store. Naturally regenerating seedlings are often used in these cases for conservation and vegetative propagation. Since seed storage will be difficult in these cases, ill vitro culture collection (e.g. bud wood) and cryopreservation may be necessary, and CIFOR will take appropriate measures to achieve this objective.
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Management of germplasm collections. With the availability of facilities for conservation of valuable germplasm, it is necessary that resources and facilities are also available for multiplication, regeneration, evaluation, characterization, documentation and distribution of this germplasm. It is also necessary to ensure that during conservation and management of the germplasm, its identity and genetic stability is maintained. Further, for safety, samples must be duplicated at different sites, particularly when older collections are transferred into modern conservation storage. If these precautions are not taken and facilities for management of collections are not extended,some of the gennplasm repositories may become gennplasm morgues or mortuaries.
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A summary of the available accessions, their regeneration capacities and facilities available for distribution of these accessions in the U.S. National Plant Gennplasm System (NPGS) is presented
Accessions from NSSL (National Seed Storage Laboratory )and Regional plant introduction and conservation facilities available for distribution after regeneration. Values shown are number of accessions or locations.(After Cohen et.al., 1991; Science 253:P. 870)
| Crop: |
Facility* |
Accessions* |
Accessions able to regenerate per year |
Accessions sufficient for distribution |
Location available for regeneration |
Barley: |
NSSL |
721 |
|
436 |
|
|
NSGC |
26,168 |
5,000 |
22,175 |
2 |
Maize: |
NSSL |
21,671 |
|
1,865 |
|
|
NCRPIS |
8,783 |
450 |
7,000 |
2-7 |
Peanut: |
NSSL |
121 |
|
29 |
|
|
SRPIS |
8,165 |
1,100 |
2,000 |
1-4 |
Bean: |
NSSL |
6,427 |
|
1,065 |
|
|
WRPIS |
11,030 |
600 |
10,200 |
2-4 |
Potato: |
NSSL |
3,262 |
|
86 |
|
|
IRI |
4,272 |
300 |
4,000 |
1 |
Rice: |
NSSL |
942 |
|
205 |
|
|
NSGC |
16,010 |
5,000 |
13,899 |
1 |
Sorghum: |
NSSL |
15,043 |
|
8,797 |
|
|
SRPIS |
17,604 |
2,000 |
15,600 |
4 |
Tomato: |
NSSL |
1,984 |
|
1,202 |
|
|
NERPIS |
5,615 |
300 |
5,500 |
1 |
Cowpea: |
NSSL |
279 |
|
255 |
|
|
SRPIS |
8,133 |
1,500 |
5,500 |
2 |
Wheat: |
NSSL |
1,597 |
|
619 |
|
|
NSGC |
42,478 |
5,000 |
36932 |
2 |
Totals |
NSSL
Regional |
52,047
148, 258 |
-
21,250 |
14,559(28%)
122,826(83%) |
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*Acronyms for regional plant introduction and Collection facilities are as follows: NSGC, National Small Grains Collection; NERPIS, North East Regional Plant Introduction Station; WRPIS, Western Regional Plant Introduction Station; NCRPIS, North Central Regional Plant Introduction Station; IRI, Inter-Regional Potato Introduction Project; and SRPIS, Southern Regional Plant Introduction Station.*Values for NSSL, indicate number of unique accessions not yet in the regional plant introduction facilities.
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Similar information for CGIAR centres is presented. The facilities for ex situ conservation programmes, however, differ in developing countries, U.S.A. and in IARCs (CGIAR centres). These differences are summarized in Table 53.3 and suggest a need for bilateral development and funding, so that the developing countries may join in the global network of base collections, without the need of excessive duplications of germplasm accessions.
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Comparison of the current of ex situ conservation programmes of crop plants in developing countries, the United States, and the IARCs (After Cohen et. Al. 1991; Science 253; p. 868)
| Characteristics |
Developing countries |
U.S |
IARCs |
1. Major regions of diversity represented within boundaries |
Many |
Limited |
Some |
2. Participation in international germplasm exchange |
Limited |
Yes |
Yes |
3. Ex situ conservation policies developed |
Very few |
Yes |
Usually |
4. Fully functioning germplasm system |
Limited |
Yes |
Usually |
5. Long-term storage facilities |
Limited |
Yes |
Yes |
6. Exploration interests |
Yes |
Yes |
Yes |
7. Long-term storage facilities |
Limited |
Yes |
Yes |
8. Regeneration capabilities |
Limited+ |
Some$ |
Some± |
9. Regeneration sites |
Some+ |
Some± |
Some$ |
10. Data management expertise |
Limited |
Yes |
Yes |
11. Distribution capabilities |
Limited |
Limited$ |
Yes |
12. Able to train scientists |
Limited |
Limited$ |
Yes |
13. Able to provide technical assistance |
No || |
Limited$ |
Yes |
14. Hold global base collection |
Some |
Yes |
Yes |
15. Operative germplasm quarantine facilities |
Limited |
Yes |
Limited arrangement |
Often conditioned by national policies and by number of accessions with adequate material for distribution (see Table 52.1 and 52.2). t Limitations imposed by lack of resources, coordinating mechanisms, and availability of appropriate sites. t No one genetic resources programme has local access to a complete range of sites for regeneration. §Limited by availability of personnel and conflicting responsibilities. II Except in very few cases.
Gene banks and core collections. Since it has been considered necessary to study and conserve all available useful genetic diversity of crop plants, the accessions in gennplasm collections at gene banks are ever increasing. Thus, the national gene banks and those at IARCs have entered an era of increased activity and responsibility, particularly for their own indigenous crop gennplasm. Under the Convention of Biological Diversity (CBD) also, individual nations have been assigned the responsibility to conserve and use their own biodiversity. These responsibilities have become difficult to be discharged with limited resources, particularly due to unrestrained growth of accessions in different collections. Consequently, the issue of handling, maintenance and sustainable use of crop genetic resources has been widely discussed in the recent past. It is often argued that we should devote our energy, effort and resources to maximise the useful genetic diversity in a limited gennplasm collection and ensure its use in plant breeding, while still retaining in reserve those accessions which are apparently not of so much of a direct immediate use. In view of this, Frankel (1984) proposed the" concept of 'core collections' as a solution. A core collection would represent the genetic diversity of a crop species and its relatives with minimum repetitiveness and still representing the entire range of biodiversity that is available. The remaining accessions will not be discarded but would be managed as a 'resource collection'.
While accepting and implementing the concept of 'core collections', a study of the nature and structure of total genetic diversity becomes important. The methods used for a study of genetic diversity may involve clustering based on similarity, and branching based on dissimilarity. While 'clustering methods' are based on phenetic analysis of data on accessions, the 'branching methods' are based on passport data (cladistic analysis) combined with knowledge about natural selection, domestication, distribution and utilization influencing the structure of the gene pool (actual accessions may not be needed). Genetic markers used in these diversity studies include morphological markers, storage proteins, allozymes and a number of molecular markers (RFLPs, RAPDs, SSRs, AFLPs, etc.). With the availability of molecular markers, it has also become necessary
and possible to locate new useful genes n a representative, yet severely limited sample, Le. the 'core collection'. Thus the use of molecular markers has given an added impetus to the concept of 'core collections', which may generally represent 10% of the total collections and may still effectively retain 70% of the alleles available in the whole collection.
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