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Gene Function Determination-An important aspect of functional genomics is to determine the function of specific genes/anonymous sequences. A powerful way to achieve this is to clone the gene, mutate it in vitro and to reintroduce the mutated gene into the host organism and analyse its effect.

Researchers have used high throughput strategies to mutate every gene in the genome, and collect the mutant strains to form genome wide mutant libraries. Such libraries have been developed in several model organisms like bacteria, yeast, plants, and mammals. This is sometimes dubbed as mutational genomics.

Such a library can be generated in one of the following three ways.Systematically mutating every single gene in the genome, one at a time. This will generate a bank of specific mutant strains. This can be achieved if the entire genome sequence were known.

In the random approach, genes are mutated indiscriminately. Individual mutations are then characterized and catalogued. This method can be applied to any species. The most popular strategy for random mutagenesis is insertional mutagenesis.

In this method, a piece of DNA, e.g., T-DNA of Agrobacterium is randomly inserted into the genome causing disruption and loss of gene function. The inserted DNA sequence is used as a tag to isolate the gene into which it is now located.

In this approach, a group of techniques is used to prevent the expression of specific/groups of genes. In case of animals, use of short double stranded RNAs is a powerful tool.