| Database |
Information available |
Source |
| EMBL Nucleotide Sequence Databank (European Molecular Biology Laboratory) |
DNA sequence |
EBI,U.K |
| dbEST |
EST sequences (redundant nucleotide sequences) |
NCBI,USA;EBI,U.K |
| Gene Bank |
Nucleotide sequences (nonredundant or less redundant nucleotide sequences) |
NCBI,USA |
| HomoloGene |
Homologous genes in human, mouse, rat, zebratish, cow, represented in Unigene |
|
| Mito |
Mitochondrial DNA sequences |
NCBI,USA |
| PALI database |
Phylogenetic analysis and alignment of proteins |
|
| PDB (Protein Databank) |
Sequences of those proteins whose 3-D structures are known |
NCBI,USA;EBI, U.K |
| PIRs (Protein Identification Resource |
Redundant protein sequences |
NCBI,USA |
| RefSeq |
Messenger RNAs and proteins of human, mouse and rat |
|
| Ribosomal RNA database |
Ribosomal RNA sequences |
|
| NR |
Nonredundant entries from GeneBank, EMBL, DDBJ, and PDB databases |
|
| SWISS-PROT |
Annotated protein sequences |
NCBI,USA;EBI, U.K |
| IMGT Database |
Nucleotide sequences of immunologically impotant genes |
EBI, U.K |
| UniGene |
Est sequences; ESTs for separate genes grouped into distinct sets to avoid redundancy |
|
| dbSTS |
A nonredundant database of GeneBank, EMBL and DDBJ STS entries |
NCBI,USA;EBI, U.K |
| Vector |
Vector sequences from GeneBank |
NCBI,USA |
| TrEMBL |
Protein sequences obtained by translation of all coding sequences in EMBL database |
|
| Yeast |
Yeast genomic sequences |
NCBI,USA |
| 1. DDBJ (DNA Database of Japan) |
Nucleotide sequences |
GenomeNet, Japan |
| 2. KEGG (Kyoto Encyclopedia of Genes and Genomes) |
Metabolic pathways in many microorganisms, complete genomes |
GenomeNet, Japan |
