Back to Home
Home >> Isolation, Sequencing and Synthesis of Genes >>Use of Transposable Elements - Transposon Tagging
Back to Home

Use of Transposable Elements - Transposon Tagging - The transposable elements (TEs), in some cases, have been effectively utilized for isolation of genes, when the gene product is unknown. In this case a transposon works as a mutagen and therefore as a gene tag.

Following steps which are involved in this procedure:

(i) Clone a known gene with a scorable phenotypic effect.

(ii) TE is transposed to this gene to get an unstable allele.

(iii) This unstable allele is cloned and TE is isolated from this unstable allele (this is 10 select a TE which can produce unstable allele).

(iv)This TE is transposed to a gene of interest with known phenotypic effect, to produce unstable allele.

(v) The DNA is extracted from this mutant.

(vi) TE sequence is used as a probe to isolate and clone the mutant gene (carrying inserted TE), so that we can then isolate the gene of interest.

In maize, TE like Ac/Ds, En/Spm and Mu 1 have been isolated using the genes Wx, C2 and Adh1. Similarly, TEs like Tam3 and Tam7 have been isolated from snapdragon (Antirrhinum majus). These TEs have been used for gene tagging experiments leading to isolation of genes. In maize, several genes like Bz1, P, A1, Cl and C2 have been isolated successfully using gene tagging method.

 

For transposon tagging, often transposable elements endogenous to species like maize and snapdragon have been used However, rarely transposons available from one plant species can be moved into the genome of another plant species, whose gene is to be isolated.

For instance Ac, element of maize has been transferred to tobacco, where it can integrate into any lacus permitting transposm tagging and gene isolation.