Back to Home
Home >>Molecular Maps of Animal Genome >>Physical Mapping of Chromosome Ends Using Telomeric Fragments
Back to Home

Physical Mapping of Chromosome Ends Using Telomeric Fragments - A universal deficiency in genetic maps of higher organisms is the absence of markers that identify the ends of chromosomes. Unique, physically defined genetic markers associated with individual telomeres would provide the boundaries for genetic maps.

In view of this, availability of a molecular marker representing the telomeric sequence, will be a great help in preparing genetic and physical maps in eukaryotes. This telomeric sequence has been found to be a six nucleotide sequence that is repeated in the telomeric region over and over again without mistake.

The sequence has been isolated in Arabidopsis, Homo sapiens, Tetrahymena, Paramecium, Oxytricha, Saccharomyces, etc. and is G-and-C; rich with a general formula (T or A) m(G)n, which is (TTAGGG)n in humans.

When this telomeric sequence was used for in situ hybridization, the hybridization took place in a wide variety of vertebrates, showing that the sequence is conserved and variation though exists, but should be only minor.

Biotinylated synthetic oligomers, (TTTAGGG)6 and (CCCTAAA)o' homologous to the consensus sequence of the telomere in Arabidopsis thaliana, were also used for in situ hybridization to root tip chromosomes of barley and rye.

Their presence only at the ends of chromosomes was detected (Schwarzacher and Heslop-Harrison, 1991). Chromosome specific subtelomeric sequences for human chromosomes have also been cloned, which can be used to find the ends of specific chromosomes (Riethman et al., 1989).