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Post Translational Modification -

Primary translation products undergo a whole variety of modifications, which are vital to the production of a fully functional protein. These post translational protein processing steps contribute to post translational modifications. These steps are more varied and more important in eukaryotes. One reason for this is the existence of more membrane bound compartments into which proteins must be directed.

Polysomes can occur either free in the cytoplasm or bound to membranes forming rough endoplasmic reticulum. The membrane bound polysomes are synthesizing proteins which are either secreted from the cell, form part of a membrane or are packaged into specialized organelles (e.g. seed storage protein bodies).

How is polysome attachment to membranes mediated, and how does this correlate with the transport of proteins to their final cellular locations? It has been proposed that the polypeptide itself carries a signal at or near the N-terminus which mediates attachment to the membrane. Translocated proteins carry an N-terminal extension of about twenty amino acids, termed a signal peptide; it binds to a receptor in the membrane as soon as it is synthesized and emerges from the ribosome. "Binding initiates transport across the membrane, which occurs concurrent with translation, and is accompanied by removal of the signal peptide by a specific membrane-associated peptidase.

Analysis of signal peptides from different polypeptides has shown that there is no strict sequence conservation between them. However, the central portion of each signal peptide is hydrophobic and a number of methionine residues often tend to be distributed along the length. Signal peptides have been found on the primary translation products of a number of plant mRNAs; e.g., on zein from maize.

In addition to the removal of signal peptides from proteins, other modifications are carried out. Glycosylation occurs during passage of proteins through a membrane, via dolicol phosphate intermediates; the protein spec­ifies its own glycosylation sites which occur at residues ASN-X-SER, where X is any amino acid and the glycoside unit is added in the serine residue. Many plant proteins are glycosylated in this way.

Many proteins remain inactive until their polypeptide chains are cleaved by proteases. This allows their enzymatic activity to be controlled with regard to time and space. It also allows their enzymatic activity to be controlled by changes in environment. Examples of such proteins include insulin, which has two chains cleaved from a large single chain called proinsulin. (Proinsulin in turn comes from preproinsulin through the removal of the latter's leader sequence.) Other examples include trypsin and chymotryspin.

An even more spectacular example of protein processing in eukaryotes involves the synthesis of multiple gene products from one gene. The original gene product is a single polypeptide chain. The functional molecules are fragments of this chain produced by proteolytic cleavage. Sometimes different types of functional proteins are produced by cleavage at different points in the chain. The best studied example is the complex of polypeptide hormones produced by the pituitary gland.

Other types of processing involve the addition of moieties to the amino acid residues. In addition to the carbohydrates added in the Golgi apparatus, moieties such as lipids, complex cofactors, and phosphate groups may be added to proteins. Phosphorylation, in which a phosphate is transferred from ATP to a serine, threonine, or tyrosine residue by a protein' kinase, is especially important, since it forms one or more steps in "cascades" of events controlling important biochemical pathways.

Phosphorylation plays a part in such biochemical processes as glycogen metabolism, glycolysis, gluconeogenesis, and protein synthesis.
In glycogen metabolism for instance, the activity of the enzyme glycogen phosphorylase depends on whether a key serine residue has been phosphorylated by phosphorylase kinase or whether it has been dephosphorylated by a protein phosphatase. The activity of phosphorylase kinase is itself dependent on phosphorylation and thus on the relative activities of a protein kinase and protein phosphatases

In conclusion, it can be seen that in eukaryotes there are many steps, each of which must function properly for the successful expression of a gene. Thus there are many potential points at which gene expression may be controlled. There is also evidence that there are many points in eukaryotes at which gene expression is controlled.

Many examples of gene activation can be found, including special cases involving immunoglobulin gene rearrangements and amplification of rDNA. And there is evidence for dif­ferential control of transcription (though this may be indistinguishable from gene activation). Indirect evidence exists for control at the level of hnRNA.

Control at the level of translation occurs in reticulocytes that are deficient in heme: Phosphorylation of an elongation factor stops translation of the globin mRNA. Post translational processing, involving proteolysis and other processes, controls the activity of numerous enzymes and the final steps in the synthesis of some vertebrate peptide hormones.

The foregoing list of examples should not obscure the fact that we know very little about the control of most genes. We certainly have no general principles on which to base predictions. For many situations in plant development, we are still in the initial stage, trying to decide what genes to study and at what level the control of gene expression occurs.