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Targetted Gene Transfer - In targetted gene transfer, the trans gene integrates at the precise site where its allele is present in the genome. This is achieved by a process of homologous recombination by which the trans gene replaces its allele in the genome.

Homologous recombination may be defined as the exchange of identical segments between two DNA molecules that have identical or almost identical sequences (the differences in their sequences are limited to allelic differences). In yeast, gene integration occurs ordinarily by homologous recombination.

But in mammals and plants, random DNA integration is far more frequent than homologous recombination. The frequency of integration by homologous recombination appears to be only 0.1 to 1 % of random integration events; this makes the recovery of transgenics representing targetted gene transfer quite difficult.

Recent refinements in the techniques, however, have increased this frequency to 10% (routinely) or even 50% (in some cases) of random integrations. As a rule linearized gene constructs are used for transfection since homologous recombination between the transgene and the chromosomal gene is promoted by the free ends of transfecting DNA.

The approaches available for the identification of homologous recombinations are as follows:

(1) When inactivation or activation of the test gene occurs due to homologous recombination, but not by random integration, and produces a selectable phenotype, such cells can be scored and selected for.

(2) Alternatively, a large number of transfected cells/clones may be screened, often using PCR amplification, to identify those having homologous recombination.

Targetted gene transfer has the following two chief applications.

(1) It is the ideal approach for gene therapy. Further,

(2) it permits an analysis of the functions of or the effects produced by a gene cloned and/or subjected to site-directed mutagenesis in a complete animal.

Targetted gene transfer offers two unique advantages:
(1) it places the functional trans gene into the same context, i.e., the transgene is flanked by the same DNA sequences, as the defective mutant gene it has replaced, and

(2) it precludes the possibility of disruption of an important gene, which may occur due to a random integration of the gene.